Annotated gene sequence

GCTCAGCGGCAGAGCGGAGCGGAGCTGTGAGGCGCCAGTGCGGAGCGGGCGGGCGGGCGGGCGGCGTGAGGCGGAGCGCGGGCGGCCGGCGAAACTCCAA
GGGCGGACCGCGGCAGGGAGCGATCGGCCTCGGGCTGCGGGAGCCGGAGACCGCGGCGGCGGCGGCTGCTGCAGCTGCAGGAGGAGCCCAGGGAACACCG
CCCCTGCCTGTGCTCTGCCTCGGGCCATCGCTCCTCCCCAGGGCCCAGTGCGGACTCGCCTCCGTGAAGTGTCACACCATGTCTGACCGGAAGGCAGTGA
TCAAGAACGCAGACATGTCTGAGGACATGCAACAGGATGCCGTTGACTGCGCCACGCAGGCCATGGAGAAGTACAATATAGAGAAGGACATTGCTGCCTA
TATCAAGAAGGAATTTGACAAGAAATATAACCCTACCTGGCATTGTATCGTGGGCCGAAATTTTGGCAGCTACGTCACACACGAGACAAAGCACTTCATC
TATTTTTACTTGGGTCAAGTTGCAATCCTCCTCTTCAAGTCAGGCTAGGTGGCCATGGTGAAGGTGTCAGTGGCGGCGGCAGCGATGGCAAGCAGGCGGC
GTTGCTGGGACTGTTTTGCACTGGAGCCAGCATCAGGATGTCCTCTCCAATGGCTGTGCTACTGCATGGACTGTATACTCGATTTCATGTGTATGTCGCA
GTAAACAAAACCAAACCTCTTTCTGTTTAGTTGCCTGGGGGAAGAAGGCTGCTTTATGTTTATTTTTCAAGACTTTAAAAATATTTTTTGGTTGTATTGC
ACTAGGAAATCTCTCCCACCTCTCCCTTTTCTCTTTCTTTCCCTATACAAAATAAAAGGCCCACCATAGAGACTAGGCGGCCGAAAGACTAGGAGGGCTG
AGGAAAAGAAATAGGTCTCTGGAGGTGGAACTAAAACTGTGCAGCTGCCTCTTCCTGGCGGTGGATGCTGCTTTGGGAGGGCCAGGGAGGCTGCAGGGGG
ACAGTGTTGGGATTGTCAAGGAAAAAGGGGTAGGAAGGAAGGTGGAGGGATTGATCTAGTACCAGGGAGAATATTCCACTGAACTGTGATTCTATGGCTT
GGGGCGGAGGGTGGGGTGGGGATGCCTTCTTTAGGGGCCCTGAGATGTGTTTGTCTGTGGTGTGTGGGAGTGGGGAGCAGATTTGTCTTGCTGTCTTTGT
CAGAATTTCTAAGTAAGGGCTGTGTCTTTGTGGATTACCTTCTTTTGTTCTTCCTGCCAGAGATCATGACAGGAGGATGCTGGGGTAGGATTAGCTTGAA
TCTTTTTTTTCTTTACATTTTTCTCCTGTCTGCTCCCTGCTTAGCCCTCAGTTTCCTCATTCCTCTGGAGTTCTCTTAGAGCAGCCCCTGTTGTTAGTTG
GCTGGCAAGGGAATTTCTGGTGACTGTAGTTCCTTAGTTAGGTCTTAGCAATCAAACCAAATTGATGTCTCCCTTGACTCTTCTGTGTATATGTGTGAAT
ATGTGTGTATATGTGTGTGTATGTGTGTGTGGGGTTTGGGGTAGAAGGGAGGGAGGGGGCAGGACAGTGTGGAATCTCTAGGGTGTATGGGTAGGTAGGG
GGCACAGTTAGTTCTAAGTGGGCTTTTATGCTAAAAGCCTCTGGGGATATCTGTTTTGAAAATAAAGATAGGTGTCCCCTCCTTGCTGTCATCTAGCCCA
GACACTCTGCTTGCTCTCTGGCTGTCTGCTCCCTGGGAAGGCTTTAGGAGGACCACCCAGGACAGGATGACCATGCTGCCATCTGCTCTGGAGCTGGGTC
TCAGTGCAGAGGGACAGTGACTGTGGATGGTTGCAGTCTCTGGTGGGAGGTGAGGATAGAAGTGATAAAGAGCTAAGAGGAGCTTCTGGGAGCCTTGGAG
GAGGTCAGTCTTGCAGTGGTGAAGCCAGGACATAGGAGATGGAGCAGGGCTGTGAGAGGAGGAGATTCTGAGGAGGATGCAGGGGAAATCTTGTCTGTTA
ATGAAATAGGAGTGGGGTGGGGTTTGGGGTGGGGTGGTCATTGCCGTTTGAGCTGCTGATTTTCATGAGTCGCCTTCAAAACTCTCGTGTAGGGTTGACA
ATGTGGGGGGGTGGGGGATCCAGCTTATTCTTTTATTTTCAAGTCCATTCTTGGGGCTGGTGGGGAGGCAGGAGAATACCCCTCCCTAAGCCCTTAGTGT
GTGCCGAGCTTGCTTTGTGATGTTGGCAGGGGAGGGGAGACCTGGGTGGTGACTGAGTTCCCTTTATCAAACCCTTCAGTGGGCACAAAATTGAGTGCTT
GATTTTAGGTTTTATTTTTTTATGAATGTCCAAATCTGTGTTTCCCCCTGCCCTCCCAGACTGTGTGGCCAGTTGAAAGTGTCTGGTTTGTGTTCATCTC
TCCCTCATTTCTGGAGCAGGGCCTGAGACCCTGCCACATCTCCTATGCTCTGCATCCACGCCTCTTTTGGACATTAAAGGTTGATTGATGCACCTCTGCA
CTGTTTGGGTCTCTTTGGGGATGAGGGGTTGGCATGGTGGCAGTGGTGCCACACAGTGGGTGAGGGTGGAGAGTCTCCAGGGTGGAATAGAATGGGGACT
GAAGGGAAGACCAGCCACTAGATACTGATTGGCCTGTAGCAGCACTTATTTGTGCCTAGGCTTATGCCCCTTAAGTAGAGGAAAACTAACCAGCAGCACT
CACCCTTAAGGGCTCCTGGGTTCTGCCTTCCTTGGTGGTGATGGCCAGGTGAATCATATTTTGTGTCTTTGGGATAGTAACTGCTACCTTCCCAGCTGCC
GTCATGGACCTGCCTGAGCTTTGCTGCTTCAACTTTTGCCCAAAGCTCTTATCTTTCATACTCCTCCCTTCTCGGCTTTCCTGAACCTGGAGACTATTTA
GCAAAGGGTCTGGCCACTCAGAAATGGAAAGCTGGGGATATTTAGAAAGATGGCACCTCTTTTGGTGGAACCTAAGTGATTCTCTGAATCCTCTGTTGCC
CAGACACACAACTCGAGAAATCAGCAGTGCCAAGACTTCTGAGAGTGTCTGCCCACCCCTGACTCCACCATCGTGTGACTGCAATTCTCTTGGAGGTGTT
AGGGAGCCAGAGGTGCTTTGCCCTCTTTGTGTTACTATTTCTTTACTCAAAAATATTTAAGAGTTCTTGTATGCTTGGGCCTAGGATGCTGTTCACAGAG
GAGAATGAGACAAGTAAGTTCTAGGCTTCTATGACATACACATTCTTATGTGTAGAGCAGACATACACACACTGATCAACTTTTTCCAATAGTGATAAAT
GTGTTATCAAGGAAATGAACTGGGCAATGAGCTATTGAGTGTTGGAGGTAGGTAGATAGGGTTCCTCCAGTTAGGAAGGTGGTTGGCTGATCTTGGGGAG
AAGTTCTACCTCTGGGGCAGTGAGGTCCTAAGGGATTAAGTTGAGAGACTCTAGAGCCCCAACTTCTGTTACTGCTTTAGCTGTCGTGAGTAATTTGACA
GAGCTGGAGCTTTGGGAGGGAGAGTGAGGCCACAGTTCACATTTCATCAGGGATGAGTGTCTCCAGGGCCAAAGCTCATCTACTTTCTTCCCTGATGAAA
GAGGCAGTCCAGGTGGCATCTGTGAACAACACATTCCTGCACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGAGGAGAT
GAGCCTCCACTTTTCGGGGCCCAGGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGGAAAGCAGATGGAAATTGTGGAATTCTCTCGGAAC
AATGCAGCCATTATTAGAACTGTGCCCATAGGAGCATCAATATCCCTGCTCCTTGTATCCTGTTCTCCAGTCTTCTGGGGACCCCCTTTGACTGAACCCA
ACCAAATGGCAGATGACAAGGCAGACCCAGGATGCAGTCTGTAGGGTTCAGTCCCCCTCCCCACTGGGAACAGCAGGAAAGGGCAAGGTGGTGACAATCT
AAGGGAGGCAAATGGATAATAACCAGCATGGTAGGGAATCTTCTTTGTTGCTGTGGCACTGTCGATCTCTGTTCCCTGAACTCTAGTGTCCTCCAGACTA
GATTTAAGGTGTGGTTCCCCGCTAAATTATTCTCTCACCTCCTTTCAGTCTTTGCTCAAACATCCTTTTATCAGAGAGGCTTTCTGACATCCTGTGCAAG
ATAGCACCTCTCCCCCATCGCTGTTATCCTTACCCAGTTTAATTCCACGTAGCATCTGCCAACGCTTGACATATTTGTTTTTTGTTTACTTTCTGGCCTG
TGACAACTAGAATATAAGCTCTGTGAGAGCATTTTTCTCTTAACTGCTTATCTTCAAGTAAACAGAACAGTGCCTGTCCTGTAGGAAGTGTTTGATACAT
ACAGATTGCTCAAATGAAAAAAGAAGGGTGCGAGCAAGCCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGAATGGCTGCCTTAGG
CACGGCTCTCCTTGCTGCCCAAGCCTTGCCACCTTGAAAGGCGTGAGAGGGTCACTCCCAGGTGTATTCAAGCAAGAGTGCCTGAGCCACTCTTGCTTGG
CAGTATGGGAGGATGAAATAGTGTGTTCATAAAGTGCATTTTATTTTTAAAGCATTTCAGTTTATGTTGCTGAAACCTGAGAGCGCCCCCCTGAGCTAGA
CTCAGTAATCATTAGACACATTTTTGGATAAGCAAACTGAATCAGAGAAGGTGAGTGGCAAAGCCCATGTAGCTGGTGGCATTACTAGAACTTAGCACTG
TGATGCACAAAGGCTTAACTGGGTTTGGCAGCAAGGGTCTCATGGATACTCTTTAAGATGTAGGCCCAGATCTCTTAGTAGTGAATCCCTGATGTTCCCT
CTCTTGGGGCTCTGGTTTAGCAAGGACAGCGAGGATACTTTCCTCTCTCCCTCCTCCTTACTCCTCTCTACTAAGGATTAAGGAGCCACCTCTTCCTCCT
TAAGGCCTTTGGGAGAGATGGGTCTCCTGGTATTAGAAAGGAGAGCAGACGCCTAGAGTTCTGACCTCTTGGGCCTCCCCTAAACAAAAAGCATAGCCCC
TTCACTACCCTAGTAACAAGTATGACCTGTTGCCTGTTGAGGTCAGGTGTACCTGTGTGTCTCTCTCTGTGATGTATGTGGGCTTGGTGTCCACATCAAT
GTGCGTGAATACTCCTACCCACAGACTGCTACTGTGCCAATATAGAGGTTCATAAGAAAGATAAAAGAGAACCAGCAGAACCCCAGGTTCTGCCTCTCCT
TCCTCCCTTTGCCCAGATAAAGGTGTACAGTGTTTGTGGTGAGGCTGCTGGACACTGCTGTTTTGGGCTTTCTAGAGAGAATGCAAACATGCAAAAACAG
TGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAGACCTGGAGTCGAATCTCAGCTCCAACACCCACTGGATGAACGTGGACAAGCTGCTTGATCTC
TCAGATCCTCGATTTCTTCATCTGTAAGATGGAAACAATATGTGTCTTTTCTAAGGGGAAAGATCAAATGACATCATGTATGTGAAAATGCTTAGAAATG
GGTGATGATGATGATGATGATACTGATTATTAGGGTATCTAATAAAGTTGGGGAAAGAACAAAATCCCCCCCTCACACCCTATTGCACCACCAGCCTTCT
CCCTCCCTGCTCAATTATACCCATGTTATAGGGAAGGAAATAGGGAAGAAACTTGTCTAAGGTCACATGGATGTTCGCAACAATTGGGATGCAGAACTTG
ATCTGACTCCCAGGCCAGGTTTGATTTTGATTTGCAGTGGCAGAGAGGACTAATTTTTTACTAGGTTCTGAGCCCTGTACTGAACTCTGGATTGCCCTGT
ACTTGGTGGTGGTATACAGTTCAGCAGTTTTTAGCATATACACGAATTTGTGCAGCCATAACCACTATCTAATTCTAGAACATTTTTATCACCCCCAAAA
GAAATCATGTACCCATTTGCAGTCACTTGCCATTCCCTCTTCTCCCCAGCCCTGGGAAACCACTGACCTACCTTATATCTCTATGAATTTGCCTAATCTG
GACATTTCATATAAATGCAATTGTACATGTGGCCTTTTGTTTCTGGCTTCTTTCACTTAGCATGTTTTCAAGGTTCATTTGTGCTGTAGCATTTATCAGT
ACTTTGTTCCTTTTTCTAGCTGAGTAACGTGTGGGTATATCACATTTTGTTTATTCATCTGTTGAGGGATGTTTGGGTTGTTTCTACTTTTTGACTATTG
TGATTAGTGCTGCTATGAACATTGATGTACAGATTTTTGTGTAGATATGTTTTCAATTATCTTGGGGCATCTTTTATTTTTAATGTCAGTTTTCTATTTT
TAAAAAATCTAGACAGGTTGGCAAATCATTTCTGTAAAGAGTCAGTAAATATTTTAGCCTTTGTGGTCCATGACATTAGGTATACAGATTACAATTTCTG
AACTCTGCCATTCCAGTGTGAGAGCAGCCATAGATAATATGTAAACAAATGAGCATGGCTATGTTCCAATAAAACTTTTAAAAAGCAGGGGACAGATTGG
GCCTGTGGACCATAGTATACCAACCCTTAATCTAAATGACACATTCACATGATACATTATTCTAAAGGCACAAAAAGCAAAAATTCTCCCTCCCACCTCT
GTCTTCCAGCTACGGGGTTACCTTCCTTGAAGCAGTTAATGTTATGAGATTTTGTGTCTCCTTTTAGACACAGTTAATAATGAGCATTAAAGTGGCTATA
TACTA

Loop counts:

7 nts: 1

Single bulge variants:

G x 0 bulge: 0
A x 0 bulge: 0
U x 0 bulge: 0
C x 0 bulge: 0

1 x 1 internal loop variants:

G x G bulge: 0
G x A bulge: 0
G x U bulge: 0
G x C bulge: 0
A x G bulge: 0
A x A bulge: 0
A x U bulge: 0
A x C bulge: 0
U x G bulge: 0
U x A bulge: 0
U x U bulge: 0
U x C bulge: 0
C x G bulge: 0
C x A bulge: 0
C x U bulge: 0
C x C bulge: 0