Annotated gene sequence
Experiment = in vivo icSHAPE / NAI-N3
RefSeq = hg38
Cell = HEK293T
Original Data Reference = Cell. 2016;165(5):1267-1279.
stable secondary structure
loop
bulge/internal loop
no SHAPE data
coding sequence
CCGCGACGGCGCGCCCCCGGCGGCTGCTGCGGCGGCGGGAGCGAGGCGACCGCTGAGGCCGCGGAGAGTGACGGCGGCCCGGCCGACGGGAGCCGGGGCG
GGGCGGCGGCCCAGCGAAGGAGCGCGCGGGCGGTCTGGCCCCGCCCCCTCCCCGCCCGCCTTCCCGGTGACCTTCAGGGGCCCGGGTGGCGGGCGCAGGC
CCCTGCGGCGGCGGCGGGATGTTCGTGCAGGAGGAGAAGATCTTCGCGGGCAAGGTGCTGCGGCTGCACATCTGCGCGTCCGACGGCGCCGAGTGGCTGG
AGGAGGCCACCGAGGACACCTCGGTGGAGAAGCTCAAGGAGCGCTGCCTCAAGCACTGTGCTCATGGGAGCTTAGAAGATCCCAAAAGTATAACCCATCA
TAAATTAATCCACGCTGCCTCAGAGAGGGTGCTGAGTGATGCCAGGACCATCCTGGAAGAGAACATCCAGGACCAAGATGTCCTATTATTGATAAAAAAG
CGTGCTCCATCACCACTTCCCAAGATGGCTGATGTCTCAGCAGAAGAAAAGAAAAAACAAGACCAGAAAGCTCCAGATAAAGAGGCCATACTGCGGGCCA
CCGCCAACCTGCCCTCCTACAACATGGACCGGGCCGCGGTCCAGACCAACATGAGAGACTTCCAGACAGAACTCCGGAAGATACTGGTGTCTCTCATCGA
GGTGGCGCAGAAGCTGTTAGCGCTGAACCCAGATGCAGTGGAATTGTTTAAGAAGGCGAATGCAATGCTGGACGAGGACGAGGATGAGCGTGTGGACGAG
GCTGCCCTGCGGCAGCTCACGGAGATGGGCTTTCCGGAGAACAGAGCCACCAAGGCCCTTCAGCTGAACCACATGTCGGTGCCTCAGGCCATGGAGTGGC
TAATTGAACACGCAGAAGACCCGACCATAGACACGCCTCTTCCTGGCCAAGCTCCCCCAGAGGCCGAGGGGGCCACAGCAGCTGCCTCCGAGGCTGCCGC
GGGAGCCAGCGCCACCGATGAGGAGGCCAGAGATGAGCTGACGGAAATCTTCAAGAAGATCCGGAGGAAAAGGGAGTTTCGGGCTGATGCTCGGGCCGTC
ATTTCCCTGATGGAGATGGGGTTCGACGAGAAAGAGGTGATAGATGCCCTCAGAGTGAACAACAACCAGCAGAATGCCGCGTGCGAGTGGCTGCTGGGGG
ACCGGAAGCCCTCTCCGGAGGAGCTGGACAAGGGCATCGACCCCGACAGTCCTCTCTTTCAGGCCATCCTGGATAACCCGGTGGTGCAGCTGGGCCTGAC
CAACCCGAAAACATTGCTAGCATTTGAAGACATGCTGGAGAACCCACTGAACAGCACCCAGTGGATGAATGATCCAGAAACGGGGCCTGTCATGCTGCAG
ATCTCTAGAATCTTCCAGACACTAAATCGCACGTAGGTGGCGTTGTTCCACTCGGCTATCAGGCCACAGCAGCCCCCTGGTGCGGCCCGAGACCGGGCAG
AGTGGACCTCACCTGGAAACTCACCTTCAGCGCCTCAGCCCTGGACTGTTAGAGGTGCTGCAGCTGCTCCTGCTCTCTGATCTTATTGCTTATAAACTTT
GGTGACGGTAGTGTGTAAGGCCGTATTTTTAGCATCTGACAGGTGTTTACAAAAAAGTGGTTGTCGCACTGGGAAGTGGAGTGATGGCCTCGTCTCCAGT
GCTCCTCTGGGCTCTTGAGTTGCTGCTTGAATTGCCGTGTAGACATTTGCTTGGAGAGTCCACTTGTTATTTGACGGAGGTAGGTTTCAACCCAGAGTTA
ATGTCAAGCATGCTAATTTAACTAGTCACTCACAGATGACTTTTCTTTAATAAAGTCCCTTTTCCTA