Annotated gene sequence
Experiment = in vivo icSHAPE / NAI-N3
RefSeq = hg38
Cell = HEK293T
Original Data Reference = Cell. 2016;165(5):1267-1279.
stable secondary structure
loop
bulge/internal loop
no SHAPE data
coding sequence
AAACTACAATTCCCGGCGGGGAGCGCGGTGAAGCGGGGGTGGGATCTGAACATGGCGGCGGTGGTAGCTGCTACGGCGCTGAAGGGCCGGGGGGCGAGAA
ATGCCCGCGTCCTCCGGGGGATTCTCGCAGGAGCCACAGCTAACAAGGCTTCTCATAACAGGACCCGGGCCCTGCAAAGCCACAGCTCCCCAGAGGGCAA
GGAGGAACCTGAACCCCTATCCCCGGAGCTGGAATACATTCCCAGAAAGAGGGGCAAGAACCCCATGAAAGCTGTGGGACTGGCCTGGTACAGCCTGTAC
ACCCGCACCTGGCTCGGGTACCTCTTCTACCGACAGCAGCTGCGCAGGGCTCGGAATCGCTACCCTAAAGGCCACTCGAAAACCCAGCCCCGCCTCTTCA
ATGGAGTGAAGGTGCTTCCCATCCCTGTCCTCTCGGACAACTACAGCTACCTCATCATCGACACCCAGGCCCAGCTGGCTGTGGCTGTGGACCCTTCAGA
CCCTCGGGCTGTGCAGGCTTCCATTGAAAAGGAAGGGGTCACCTTGGTCGCCATTCTGTGTACTCACAAGCACTGGGACCACAGTGGAGGGAACCGTGAC
CTCAGCCGGCGGCACCGGGACTGTCGGGTGTACGGGAGCCCTCAGGACGGCATCCCCTACCTCACCCATCCCCTGTGTCATCAAGATGTGGTCAGCGTGG
GACGGCTTCAGATCCGGGCCCTGGCTACACCTGGCCACACACAAGGCCATCTGGTCTACCTACTGGATGGGGAGCCCTACAAGGGTCCCTCCTGCCTCTT
CTCAGGGGACCTGCTCTTCCTCTCTGGCTGTGGGCGGACCTTTGAGGGCAATGCAGAGACCATGCTGAGCTCACTGGACACTGTGCTGGGGCTAGGGGAT
GACACCCTTCTGTGGCCTGGTCATGAGTATGCAGAGGAGAACCTGGGCTTTGCAGGTGTGGTGGAGCCCGAGAACCTGGCCCGGGAGAGGAAGATGCAGT
GGGTGCAGCGGCAGCGGCTGGAGCGCAAGGGCACGTGCCCATCTACCCTGGGAGAGGAGCGCTCCTACAACCCGTTCCTGAGAACCCACTGCCTGGCGCT
ACAGGAGGCTCTGGGGCCGGGGCCGGGCCCCACTGGGGATGATGACTACTCCCGGGCCCAGCTCCTGGAAGAGCTCCGCCGGCTGAAGGATATGCACAAG
AGCAAGTGATGCCCCCAGCGCCCCCAGCCCAGCCCACTCCCCGCATGGGGAGGCCGCCACCACCAACACCTCATCATCCTTCTCATCGCTAACACCACCA
CCTCCATCGGCACCCAAGCGGGCATCATCCCCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAAAGAAGGGGGCCTGTTG
GAGGCTGGGAACCCCGCAGCGCGAGGCTGCCTCATCAACGGCAAGAGGAAAGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCT
CCTCCTTCCCTACTCCTGGGACGGCAGCAAGGACATGGGGGCTGCTGTTAGCTTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTC
CATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTCACAGTGGCCTCAAGTGTGATGCCTTACAAAAGCACCACTCAGATGGGCAGCT
GGACTCTGGTGTCCTGAGACTCTGCCCTCTTCCCACAGCCTCCCTGCCCCACCCATCCCTGCAAAGCCATTTTTCAGACAGAGCCATTCCTAAGAACACT
GAAGGGCTGGAATGCTGGCTGGCCACTCTCTGCCTCAGTGGCCTCCCTACAGCCTGGAAGAAGGAGGGTCCTGATTGCCAAGGAAACCTCCTCATTGGGC
TAAGGAGACACTGGAGTCTGGAGTGTGGAGCCCCACAGTCTTGCAGGTCACATGCTCTCCTTGCACATCTGGCCTGGTTGTACCCACTGGCCTCTGCCTC
TGCCCTGGGCCAAAAGGGCCCCTCCTTGCCAGGGGAGAGACAGCCACGGTCCTCTTTGGCCGATGCTGTATTCTCATTTTGGCCCTTGTTCTTAGGCCCG
TCTGCCCGCCTTCCTCCATCTAACCTTTCCTGTTTTATCCGCAGCCCTTTTCTTCTTTGAGTTAGTAAAGATTTATTCTGTAACCTGACACTCATCTGGC
CCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACGTGCAGGTTGGAAATCA
GAAGTCTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTCCCAGACCTGGCCCGACCCCTCTGCTTCACCTCCAGCTCTGCTGCTCCTCTACTCTTGGG
TCGAGATCCCTTTGGAGCCACAGCGAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCC
TCGGGCTCTGCTCACCTCTGGTGACCCTCCAAGATGCCCCTGCCCTCAGTTTCCCCTCATGATCTGGCCTCTGCCCCCTTCTCTAGCCACAGCCTCTAGT
ACACTTTAGCAATACCACCAGACTAGTTAGAGTTCCCCACTCACCAAGCAAGACATGCAGTTTCATGCCTCTGTGCCTTCGCTCATGCTGTTTCTTCCGA
CTGGAATGCCTTCCCCTGCTCCTCCTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTCCTCCAGGAAGGCAACCCCTGTG
CCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACTTATCACACTGTATTTTACTTGTTTACATGTTTGTCTCCCCTTCTAGA
CTGTGAATCCTTAAGGGCATGGACTGTATCTTATGCATCTCTGTATTTCTGCGCCTAGCACGGTGCCTAGCACACAGTAGGCGCTCAATAAATGTTGAAT
GAATGAATGATTTAATCAAGA